Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924008.1_cds_XP_016472478.1_64709
CDS Infomation

[gene=LOC107794494] [db_xref=GeneID:107794494] [protein=DEAD-box ATP-dependent RNA helicase 51-like isoform X4] [protein_id=XP_016472478.1] [location=join(9000..9311,9691..9876,10871..11056,11259..11345,11865..11906,12240..12308,12398..12697,13112..13150,13231..13335,13719..13787,13902..14027,14183..14197)] [gbkey=CDS]
Sequence

ATGGCGGAGGTAGAAGAAAACCCTAATGCAGTAGTTGCAGAAGAAGAGTCAATTAAGAAG
AAGAGAAAGAGAAATAGAGACAAGAAGAATAAAATGGTCACAGAAAAAGAGACGAAGAAG
GCAGAAGTAAGTGAGGACAGAGAAGAAGAAGAGAATGATGTAGAAGAGCAGCATAATGAA
CTGAAGGAGGAGATTAAGAAAGAGATGAAGAGTGGGTCCGGTATTATGACTACGGAGTTG
TTTTCTTCTCTTGAAATTTCTGAGCCCACTATGAAGTCCATCAACGACATGGGCTTTCAG
CACATGACTCAGATCCAAGCCAGGGCAATTGCTCCTCTTCTGGAAGGCAAAGATGTCCTT
GGAGCTGCAAGAACTGGTTCTGGTAAAACACTTGCATTTCTGATACCAGCCGTGGAGTTG
TTGTATAATGTCCGTTTTACACCTCGTAATGGAACTGGGGTTATTGTCATTTGCCCAACA
AGAGAACTGGCTATACAGACGCATGCTGTGGCAAAGGACCTTCTCAAGTATCATTCGCAG
ACTCTCGCCTTGGTTATTGGTGGTTCAGCAAGAAGAGCAGAGGCAGATCGTATTGCAAAA
GGGGCTAATCTCTTAGTAGCCACCCCTGGTCGGCTTCTTGATCATCTTAGAAATACCAAA
GGCTTCATTTATAAGAACCTAAAGTGTCTCATGATTGATGAGGCTGATAGGATTTTGGAA
GCGAACTTTGAGGAAGACATGCAGCAAATCATTAAACTTCTACCAAAGCAGGGGAGGCAG
ACTGCTCTCTTTTCAGCCACACAAACAAAAAAGGTTGAGGACCTTGCTCGCTTATCTTTG
GACAAACCTGTCTACATTGATGTGGATGATGGGAGGAGGAGGGTTACAAACGAAGGGCTG
CAACAAGGATACTGTGTTGTCCCAAGCGCTAAGAGATTTCTTCTCCTTTATTCATTCTTG
AAGAGGAACCTGTCAAAGAAAATAATGGTTTTCTTCTCGTCTTGCAACTCTGTCAAGTTT
CATTCAGAGCTACTTCGCTATATCAAGATTGAATGCTGTGATATTCATGGGAAGCAAAAG
CAGCAAAAACGAACTTCTACCTTTTTTGAATTCTGTGAAGCCAAAACAGGCATCCTGTTA
TGCACGGATGTCGCTGCACGTGGTCTTGATATTCCTGCTGTGGATTGGATTGTGCAGTTT
GATCCCCCTGATGAACCCAAGGAGTATATACACAGAGTTGGTCGAACAGCACGTGGGGAA
GGTGCTAAAGGAAATGCATTACTATTCTTGATTCCAGAAGAGTTGCAGTTTCTTAAGTAC
CTCAAGGCGGCAAAAGTGCCTGTAAAAGAATATGAATTTGATCATAAGAAGGTGGCCAAT
GTGCAGTCACTCCTGGAAAAATTGGTCGCAAACAACTATTACTTGAACCAGTCAGCTAAA
GAGGCATATAGGTCCTATATACTAGCATATAATTCTCATTCCATGAAGGAAATATTCAAT
GTTCACCGACTTGATCTACAGGATACAGAGGGATGA

Peptide Sequence

PEP ID

XP_016472478.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like isoform X4 [Nicotiana tabacum]
Sequence

MAEVEENPNAVVAEEESIKKKRKRNRDKKNKMVTEKETKKAEVSEDREEEENDVEEQHNE
LKEEIKKEMKSGSGIMTTELFSSLEISEPTMKSINDMGFQHMTQIQARAIAPLLEGKDVL
GAARTGSGKTLAFLIPAVELLYNVRFTPRNGTGVIVICPTRELAIQTHAVAKDLLKYHSQ
TLALVIGGSARRAEADRIAKGANLLVATPGRLLDHLRNTKGFIYKNLKCLMIDEADRILE
ANFEEDMQQIIKLLPKQGRQTALFSATQTKKVEDLARLSLDKPVYIDVDDGRRRVTNEGL
QQGYCVVPSAKRFLLLYSFLKRNLSKKIMVFFSSCNSVKFHSELLRYIKIECCDIHGKQK
QQKRTSTFFEFCEAKTGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTARGE
GAKGNALLFLIPEELQFLKYLKAAKVPVKEYEFDHKKVANVQSLLEKLVANNYYLNQSAK
EAYRSYILAYNSHSMKEIFNVHRLDLQDTEG

Transcript Sequence

Gene sequence data has not been registered.